CDS

Accession Number TCMCG057C11356
gbkey CDS
Protein Id XP_018474645.1
Location complement(join(8208053..8208304,8208400..8208515,8208604..8208740,8208821..8208984,8209086..8209166,8209334..8209513,8209606..8209762,8209847..8210019))
Gene LOC108845940
GeneID 108845940
Organism Raphanus sativus

Protein

Length 419aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018619143.1
Definition PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category CE
Description HMGL-like
KEGG_TC -
KEGG_Module M00036        [VIEW IN KEGG]
M00088        [VIEW IN KEGG]
KEGG_Reaction R01360        [VIEW IN KEGG]
R08090        [VIEW IN KEGG]
KEGG_rclass RC00502        [VIEW IN KEGG]
RC00503        [VIEW IN KEGG]
RC01118        [VIEW IN KEGG]
RC01946        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01640        [VIEW IN KEGG]
EC 4.1.3.4        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00072        [VIEW IN KEGG]
ko00280        [VIEW IN KEGG]
ko00281        [VIEW IN KEGG]
ko00650        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko04146        [VIEW IN KEGG]
map00072        [VIEW IN KEGG]
map00280        [VIEW IN KEGG]
map00281        [VIEW IN KEGG]
map00650        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map04146        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004419        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016830        [VIEW IN EMBL-EBI]
GO:0016833        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGAGTTTGGAGGAGCCACTAGCTTTTGACAAGTTGCCAAGTATGAACACCATTGACAGGATCCAGAGGTTTTCATCCGGTGCTTGTCGCCCCAGGGATGATGTCCTTGGCGGCGGCATGGGACACCGTTGGATCCAGGGAAGAGATTGCACCACCTCTAACTCTTGCAATGATGATGATGAGAGCTTTGGTAAAGAGTCGTTTCCGTGGAAAAGGCATACTCGGAAAGTGTCTGAAGGAGAAATTCTGCTTCGGAGTACTTCTTTCTCAGCAAGGAACTCCTCCAAAAGTTTTCAGGAGAATGGCATCTCACATTCAATTAACAAACTCGTTAGAGGGGTACCGAAGTTTGTGAAGATTGTTGAAGTTGGTCCAAGGGATGGTCTGCAGAACGAGAAAAATATTGTACCCACGTCTGTAAAGGTGGAACTTATTCAGAGATTAGTTTCTGCTGGATTGCCCGTTGTCGAGGCTACAAGCTTTGTATCACCTAAATGGGTTCCTCAGCTTGCAGATGCAAAGGATGTAATGGATAGAGTAAATTCTCTAGATGGGGCTCGATTGCCGGTTCTGACTCCGAATCTAAAAGGCTTTGAAGCGGCTGTATCTGCAGGTGCTAAGGAAGTTGCAATCTTTGCATCGGCTTCTGAGTCATTCTCCTTGTCAAATATCAACTGTACCATTGAAGAGAGTCTCTTGAGATATCGTGCTGTTGTCACTGCTGCAAAGGAGCATTCCATTCCTGTCCGTGGGTATGTATCGTGCGTTGTCGGGTGTCCAGTAGAGGGGGCGGTTCCACCCTCAAAAGTGGCGCATGTTGTAAAAGAGCTTTATGACATGGGCTGCTTTGAGATTTCTCTTGGTGATACAATAGGAATCGGCACTCCCGGTACTGTGGTTCCGATGCTTGAAGCTGTGATGGCAGTTGTGCCACCAGAAAAGCTGGCTGTTCATTTCCACGATACCTATGGGCAAGCTCTTGCAAACATATTGGTGTCTCTCCAAATGGGAATAAACATAGTAGACTCTTCAGTCGCTGGATTAGGCGGCTGCCCATATGCAAAAGGAGCTTCAGGAAACGTAGCTACAGAAGATGTGGTTTACATGTTGAACGGTTTAGGCGTCCAGACCAATGTTGATTTGGGAAAGCTTATAGCTGCTGGAGATTTCATCAGCAAGCATCTTGGCCGTCCAAACGGTTCCAAGGCTGCCGTTGCCCTCAACCGTCGGGTCACTGCTGATGCCTCCAAGATTTGA
Protein:  
MSSLEEPLAFDKLPSMNTIDRIQRFSSGACRPRDDVLGGGMGHRWIQGRDCTTSNSCNDDDESFGKESFPWKRHTRKVSEGEILLRSTSFSARNSSKSFQENGISHSINKLVRGVPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSAGLPVVEATSFVSPKWVPQLADAKDVMDRVNSLDGARLPVLTPNLKGFEAAVSAGAKEVAIFASASESFSLSNINCTIEESLLRYRAVVTAAKEHSIPVRGYVSCVVGCPVEGAVPPSKVAHVVKELYDMGCFEISLGDTIGIGTPGTVVPMLEAVMAVVPPEKLAVHFHDTYGQALANILVSLQMGINIVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVQTNVDLGKLIAAGDFISKHLGRPNGSKAAVALNRRVTADASKI